Research Journal of Biotechnology

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In silico analysis and molecular docking studies of mannich base Lawsone derivatives functionalized ZnO nanocomposites (LSDs) against BRAF and CDK4 proteins

Krishna Reddy Satish, Nimbegondi Harish M.N.K. and Yelegara Ravikumar Siddappa

Res. J. Biotech.; Vol. 20(4); 94-102; doi: https://doi.org/10.25303/204rjbt0940102; (2025)

Abstract
Cyclin-dependent kinase 4 (CDK4) is a potent anti-cancer therapeutic target because of its role in cell proliferation. BRAF is the most important member of the RAF kinases family. 66% of melanomas and 7% of all cancers have been found to have BRAF mutations. Therefore, selective inhibition of CDK4 and BRAF may enhance therapeutic efficacy. The Lawsone derived Mannich base functionalized ZnO nanocomposites (LM@ZnO) have been successfully synthesized. To apprehend the LM@ZnO as an antitumor agent, we have performed in silico studies against BRAF and CDK4 proteins.

Molecular docking studies of all LM@ZnO revealed greater binding energy when compared to the standard drug doxorubicin which displayed -110.6 and -107.212 kcal/mol against CDK4 and BRAF proteins respectively. This study validates that anticancer efficacy is not always dependent on antioxidant activity; there could be another mechanism that leads to cell growth suppression during the cell cycle.